Source: r-bioc-progeny
Section: gnu-r
Priority: optional
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Steffen Moeller <moeller@debian.org>
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-progeny
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-progeny.git
Homepage: https://bioconductor.org/packages/progeny/
Standards-Version: 4.6.2
Rules-Requires-Root: no
Build-Depends: debhelper-compat (= 13),
               dh-r,
               r-base-dev,
               r-bioc-biobase (>= 2.64.0),
               r-cran-dplyr,
               r-cran-tidyr,
               r-cran-ggplot2,
               r-cran-ggrepel,
               r-cran-gridextra,
               r-bioc-decoupler (>= 2.10.0),
               r-cran-reshape2
Testsuite: autopkgtest-pkg-r

Package: r-bioc-progeny
Architecture: all
Depends: ${R:Depends},
         ${misc:Depends},
         r-bioc-biobase (>= 2.64.0),
         r-bioc-decoupler (>= 2.10.0)
Recommends: ${R:Recommends}
Suggests: ${R:Suggests},
          r-bioc-biomart (>= 2.60.1),
          r-bioc-biocfilecache (>= 2.12.0),
          r-bioc-singlecellexperiment (>= 1.26.0),
          r-bioc-deseq2 (>= 1.44.0),
          r-bioc-biocstyle (>= 2.32.1)
Description: activity inference from gene expression
 This package provides a function to infer pathway activity from gene
 expression using PROGENy. It contains the linear model which is described
 in the publication "Perturbation-response genes reveal signaling
 footprints in cancer gene expression".
